Support homeCell Ranger ARCDownload and Installation
Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774631612&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=auCTyV7rG~PglRbjBEGaGxXVdkRmy7GwDK~RMlkq4iALj1QqCeHo~r-j5f4ZAusSzCMYec2xdTtmafo7M-xBfjzlwZGipEL0tqioN19BWTN1S14lKQDXttal3o6jiOJijOSAgVsZKbMGUCZ0dyPukZQ3hCmXDVyYsnOdcQuHqiegf9HnNHlAGRXSWxCio4w9MiRiJMH9ix27Awi84sUAVpzBKNelNTXMGdnU7fbQzQvSQPjYIFVHqEnz4yN2vj1W8Um25x0R7i9ZP7hEdWmf6FGSrd5tCYhSx3UK1BHh2JHvHEgZQzKGCkDhxmWCjTlfibbgRLl9lsL8IW3exmwKDQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774631612&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Kf0OEpNf59NFxb6UpgnzQxBErV-3OgNfKOjrCJKFHcIGlXmDamMFPSWSGQfyLKJ5drI3x20Qeii8YjT3ZfEOSNAKkThUN3eFWq4NHAu8KSOdyCSmyhtrHAJuVqq-py-3QZeTTbQgCIk4v-8bgzUBiCj1C06YINSKnM6r4h2iQlmQfKLUymHQc2eElr0O3m3Joa~1o9zRW5ZmJ3LZ9UMQYilHCFTMTZCtJcTdBiU~KZR6a~C0unF9dYtf0KInRABOUtyaf75UocyHPga3P8hbpBvXMXHKNBbiUnKOTd6rsTJ2z5hMTw4bqeBDIgM4wOVsL2UE4L7i1GMCEqoaHWn8~A__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774631612&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Ow00WPIs64aa6QMgUfvviMWs0WGguPxlkhdzJqcMoTASTehMvp1sNyHxRIjCrNzbyBMvH-Q-Gwyd1skS9pQEqomeFwZtxsNHgda2d09MBdBwFf2pN2l1Dpy~uRnZDo5~2T-MlQV3uLNTgTqN~-DOlm4dIuDNmy0-fD-7M7oEKc074SyXD60VDKcc2fvqOcBxeWobqJOu~4nRBi9Fw67OqNPv3c9uwakgUtgTIGmFsETbthjF1wTtK~Tqaz~0tnwZUcMiD8zQZn-jRaoRgWGqlTRWJESBwCNHu0eCeep5TuxoMStN3pRqBYxW3uizoZtDaS8U2u8OfajPiUgwP~QsMw__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes