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Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774630813&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=f1ywtQX1hJGsRka0pAwZbPwhA4ybhAW5ysfrI~9OrgFJWxy~UYbFuX8K21b042pCjJ0bA8fxC4fXH-RIBVd-~vPtYbPow-GwnMADIWj0YNZ4KqgRJYqgz1DeGY62VuX4CzUfqCuZJNGQg6bKaRVSJiyvTRDsB3xpPhhVLVU7hcUVLjicGNVRGllfg6L2Hio5mzJeItYC-2KmHxzTMapljQK~Hzz4d5HOYk03QPTjoug2tBu30GDP4k4OdrHauVNg8vLmkEpTFYaIFBBjOBVggvVAFdzjiiKNypLacPR8E05H27oWUx-xUeVd2asmwPbwORUwPA2tToO6KhyFFUquCg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774630813&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=RMuk--TP6cxd4oEp2ThUarZ19fZt3weMrCx0USFVrZ3nvGCSkzjPci~x5f8hEvRjIGMccAocECvCNPWVbm0caZg8lSb-dgmWonkquHnXczokv65u~a9fH61Z4CbPWVa1xIgsuKnWGFYQ1vq~e2R26Yclz5K1vstusrTBBhmUNnU-gu~xXSA7PSgkzrdN0knGNZX0HOv5F80TcViT1DRevGD0tDtWxN-bBkovl2RY3wGlJ6NUSlH4WWcRszg8Ge60G2~YBxy6tKMJ~5Gbvb-HvFJ~ubLRP5Yz2tyOUtPCQHWjGWhpFuOVhQklQHV0xpgqt9ph1Rm9xDcW6RkDlz2oyw__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774630813&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=e6eDEflTwSjs-P8OlGsUQ8QyXHt6kGgbBKKnfq7EMmLtFEn6rLdWhtIO9S4zGcpb7PXzzSoWSejqTNbhjTOU6LMSe6ea8dabRj7z0QVgj2oUEVTQSKSQZt3TtryTmTobQRcIz6OJcuGvbN4fiHv-oquLOtpH~lmaxtwzv-prVBnPRkjq~MzRRVYXlyM6H31xUFosEc77j4Q0XFrqJOFVaTiWvrxzTogl08S946KMPPwGzGPaLOaHaKAIKVOqxgJ209RFYIrg1oe9OnjqYs4fiszwz3i7tvSkIlbwvxzjmotUMAVICKHG4ULoOIpqGmH9OP00AiuTxTkBAU-dH5lgKw__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes