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Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774637656&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Mj2yMonW8bq0oFbE7PuYnLt1J1djAiqri9S22CIwRZ6Lb70vdAdvG0TS4NeMc~mcDPQri9LpmvMQHplUy7qSqGAII~FdeQoIKWEb~caoBKa7xa7Lgc7GJE760ClVuP5TfInKyg8YYsxXql-ETtYeOeSHQhxrfSKjHLvoxxlPI0~um1AqLZi7m84wpyQylUKnHuV6IkraxezvaUx578~W4kiZZdQfgXsXgdCqG6B5fiynHa9E3y4LOU5-UXb1o5FcGhH~fQQSGPAby~ANksXIArdj~VjsbSbyKCI6XLMMz9pIstBAGOBYx-6If2ynPggDnif0q4xDsQfxp-8njt1JOw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774637656&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=hfnasoKBOY-Dh8mV91Sx0V5oQuchfoMHtvNMLGImyEMB~wXzXdvT8YnmKu-Dsl8~BkEPotIDUq9l4BVLQxCtLwK4RTklXlbrNBM4wMDI5nCdp-YGHy1qcqu9IpDC3ZG67r695ZYL9reYtBDGX0hFVMdK1dMU2jv2BHtghFtVQJM5mPpgPR~nSKZqZL3dz0cN-04XWRsakEbWMPfuiIw68mlKLlncPYkH4vJO0gWWr~7kZ0JLll42b3AeJPdnUC2uhx9zzOuaNfeocCbkuiis3POSmb19e90EHoq8ybiK4n48BOgUMEaDT52Si3wO4sPLNEAu916tJRm5fCc608QRSQ__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774637656&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=MFCmFhYc2QIvkwxQo4jrCKZan7AUgPIXc6J4n2z80daP9AhtQTfleDdKKvYixWkrR58gzKCHDgoCdG-UGj7-fYvpfA-xFlgw4-0bXutHRNnDD-vyQ4sU4mmO03WgKT5bttBHYKdhcm4p1bZyuCYQtc0qt9oCZXNTM-NJLklvY3hKM5NnxoXoWaIo19-x5BCH0omq3rImAkNpi-EL0DuAMzpcnw3XQMgJSRRdqXm9Zb81PtxIEJSPCIwbUnU0oMb9CjwkI09zP0acXWTUq~P2WvWjxenE8gzDeSZPTvuxqpzRXyIY2mOjr~oEo9zzauERLAiryjexbaqBGb17hn9x9g__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes