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Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774638885&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=LmbNspNCT4Y8p5hVgk~tZDYBLgdzOsbc63v0qLifBExrPTfenNVTLpJ1TkQKSRRqld-NVXyh9HFODSRtmP3tGoyGYKgSTqqrWI7qnxAIiobFgMgjd3-rUs3q-vynKBJsKICLEVQge2HILJcXSMwvERPiE0734xXMICTID3Ir3dX5HzKxkt7hRyEJlHd~pXu9JCjUk4jgXT6H-MgVZIsaer7UwqroEKCfFck7dLiJ2Z~Kmh9aXjurja2QwHxJAet0nQtsT1LprALwckjQ~E6Tj5bVn3POL9ez-c5QTmf6C4F-5QhRRi-sAXyHbuq-Mr-2iuHz-8Do54Q1tntqNioWxQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774638885&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=RigMt~6xV~1W-1wWAozCxEqt0rgfPewz6nNBk2jrjL0uxQsXfvXPVIjcT-jE01-2NdNnbPSCPzkoUtQPgXfEd8r3PdGWwS8HZ22aEh8Ctsyg6mfyPiAN0LOklOHhXcRjaU3gkMD-1OIJoT9maFczsUMKq3UCUROviz4CKeZBpN88dx1hIOQ6sQHIeG8xFWsXuR8~2JlDHEkiq4sVCFhvEciY0pND0ZZsSupvWmMqpJd7P~kQUGNiW3SBPXzgKHL3IAbtgYaJHqAJOKS8PwFAT4ife7dS6RyXN8fx49eNSmAiIIM9M1v~7gPR8OVwX0k58A4uHlBVcjMzmmYGZHM-9g__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774638885&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=E2PLQrt3V3xqUZTFUvzxvWmsrVUq51rj40dfwPBb5sOJ-BEh8WZfesoyqhQa85ZxG6i80ynTCZSopP3Njl1i1T-bOfXsMTimANC40Opk8K9JpzT7HFID-aHhkfU84er3Fc2t6uuUGWgffs7ieuSHX41O35cRiJZ~~juMLDvKvMK61phT4kAd6UiOMZZUMyET5AEcw~PKqArwmshGb6IGP0xdVHNeU6982ceNpS4rMQLfqRrfX-O-3Eyf6-EyGlDlwIDS5Ui~hLDvsA9yK9Sfqfn5YbEd9aB05FaLoNW0-feeO5Pmw5xFua765a-E~pWhygL4Wej-EO9D1DLidzWFwQ__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes