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Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774637496&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=AA7dQFJLCSu0TPm~5~qON-pyL528tfIqD2c-bdBFD870VmevhxpQDi3C1akZhamPU1p7MOFi7BSMsL6FlVVfy4l-wZlemxgEwPDc6O7Ul47rt2qn7gobzbm3un1Fo6I0zkdXLi4zZxo4w1tnFPYpCFckqCYVXKWlyBmenCxF5P6qIHjoLUK8aHnQH1k4Uw0HrEILdH6U-5lbwkImS4qMnIBj7c9oP0Na5rbdaQmkX6fKnYIzNC6dxHV8WbNaFqo~Nvi2PDt5yXovAkaek1VA~YTvQCLNrtxra-YY-d2Qunav0qr4vylC0jIzIFods5TyOL4E7mAN8ULYbzHle98pBw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774637496&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=F2HkH~47OgNR1pc8w1eh-NDyEDud9WOmJ~7LjzFjk5MERWXhzpnHKTPNzG4eeCK2DgQUxJMPg5cXxd31qgbSVX-ra286Q0KVNw-OinQm-kBNYUsk2ZGJa1bJyXTZRTz~dYcpqyHrWcRXCSIagK8GS1kuQp478RMIyrwQ8h7Aa9Y1HT5IXbf90BuWOg8LAAPGpzvTKsdD2AH3LFuwilG7FlBoJlAxWnyGU0WUhzlxL89XQ99PCptA3Uq8r2EIPqBZW57Zh3U8kkE7a~MoRbPQf1ScXp~O~0iGVs~EnfkuLrn7dDPIFcYpqBpMWeTdDuHdFImqu0JaCN4VJ1R0uwitzA__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774637496&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=MAbjLsrwtYJeCZHg53DtFdSBeYCUIIgPb-w3RDeFtPKCPpPViBXVqkUHnpmxPKv7yY78lCSyfge4eBFCia0nqCfR~MJqgBEzysDuY3PfI67CCj1UE02eCp4cRWS6q5118DZkNWuBrhI4zTZlfA3pEF1pwWZs-vfGkvRLxVPbAVt77b-wJmivhVyMSC~VI9ruvdEEWvuLJa~TlJ-72RKZk5wKr3ipIAG8QRoHF6TN6ZnOlT0x08A1j~AtkTRe7wUhi0maA6zCCv-DamFmNG4HwfTMEun-1zlkHtElZcqkf-ZkSh~a1PhFanYY4MOWep45W~WiQbp6z81ldC6HpsDOoA__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes