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Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774643979&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=LwWhbp73blytw9EIe9mtlKmTLd3d4jQ5DfhDM5Fh91Y4vqcCEHNHIr49hFeSC~YRMU~5DkyxDUUJU6tCrjGw5E3qyJPV4qTdPyVXQR8RMqlRLLrlv4g28Mhf-HRiM--Qrai~OSLG8PZkABV03UK8i6pkA4hXLjpa2S1XCHT1oQGjVXGMP4tKrNDfwiWYvHI1aSjFTnHlBq1U2mkrrxKz9ML0btXVlzjxVVjD3647UFSXgAz~EJtRbeBXGcmJu0uztMXhqqjYY7sA8Dr03gSjytRsXBbTmu~cpsW~Zl6gI7GM2oyMdbSbqbWbSwwFG-fBml6lgMt8CFJxKWi5iouRRg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774643979&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=oeQPs4BNjxV-M2wef99EiULwhlcqpjpft9mNykp26ISNuFhw717bzyb0WmfN4Uz2AF98XPBmZioExzVATGZZcAvdmQE~hDpnKOPWIU2cA~NpbnEdv9E5rHeOLEvOg-aNDfxW67fWbZL69GyC-c8xu-Pg0ZxljPTVyDabXGOyqxRiGQp3E7gXtJn86aEq0nvoZRxEdmpIegP9TfzyIo991xHYmNdBKHH8VN5jPDEiCCNCLD2MBdmBVb5CHHDaCF-Soyc4PJoaUOD56oe6DmXDkELqnhNKsgT1djZQ-a2XL4iNCFGFwhW38zy8hBJh5BFmyFJke1iiSYYQp01PtZv75Q__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774643979&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=QcvgyafC4y9p3lqnk~SYUpIpzcwC9aY6QxQk8CmnKkIhumKhRtoX4EM9C3ZXG8ZWeccJYwlBXvb3nk~~acjGW-atLgnYtX7T1DU50mUkQswALjPZnafamtsAY0htlvP7PIgxbdhxv4RvIqsgvwuvhpHUaz0PG4s9Wz2ldM3DnI2gtSKZWYI9DOvMG9kGwrBgT4QDH2j0YTHuD7UzEPdFHD9teCxC4hEf9IdrBklEukE~0CEhTbYORo5dVonmt1gnLpXJyAsMNPEAAvWP5teUYq3Udx~E5MFHKGpQ15Q3jC3eflfgUe1GeiCnnvkRxvUxn9Qe6PBZg7Y27C43H6-kQg__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes