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Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774630801&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=R5iJj2DqFwv8jupzJgkMdYXR01syZ~LvARnvzCo-UOBqq-eTxVGkj6O0hbK6K4ZFdNDOJp3A5xkHz0fyhm9majL-G0KrUwjtSYTK88N2672ez1cMJZJZRDesaMCPHTkDu1hmZl8ncLY0XBKCXxzExMo-i9MdTPyyyO6oal95ngyChhLNNTDpAGPEXXFXV6FzCD2VTR5zJB~PzSnd~VGloqNPGmTqhXNguqalLT-OMIcnHYCM0DB9tCSDy9ZMxQifkhtfmSFiQ4PodoEYBnj9z4pZ~PzZCGxcRCNP4XZzJUhiC3XDZTQWGpdaLcS1XRx~KYvPpkSxu-cw1hwkcjuKxA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774630801&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=HbHgzEp~gpb6blYWbKoMiGOg4FdDnFPM~OyRaL4qK0I5LFDU59YOMtE~DaNPxeYAVIuY3Vvv9Yj2iPYI4duyNVH8KVUm734Vl4DS0HSIhOVSLG2Zm2dk6qpoReyHCnanZdjM4lm5sGhFh6S4i1yl3-1zOa1AZ0Slvt-~0~3~-NlsjreFy17Gjz54g-jqw2k9NlDa1pb7llH5WJDwRi7YmQ-nYH2sJeEFsS3S6V2IOelN~Ucch80vDEm-YmWYzNVW0aAnfxHHZrErTHE6jaUoUks1EwK9xOOEWuAnt6a2h3GHvDoNG9PjVeLWFxcXuCfg7IR18DcclsACfI7HeIUUYQ__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774630801&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=eMo32RSDcfjbay1VDNHjq74Jaz7Q2VaFC7XCzrKGEPB-qko9VjwpO03iidxjnFVrG4yICu-sGCaiBsdevsrW5aijeZlDJN0yp4LRHtZ~SS7UEDnMUNLK9hQlNveuBbmoknlpabyKt4cICfM1PK30WTK1pSJfgFZO~N0GRb7ENrzyqus4Y6NU7PxrfNmKKVtPjTwMF2K~Vpab-ETlwzPkPD7Q6w3duEPV2jS-nIJ2imfl6P~2kqK8P-1A8SuETTMgIQl6EyLBIdMBeo~f3tM15H-raH-76kLAirs9wCXGdV7n5gHmpTec7atqr5kWKpORViiWWR-QSEB0TmU8HpS-iQ__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes