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Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774637653&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Ndid~DkDEqGS1phqQkel9SV4xoCtOqGY554ef7v7Cp~twn-0thmvt8JtXx7caSpQjYk5an5rmVZkS-pDs65sabPfm2BWssRbcv1PLQDUFE39mLzwaVku-BPn6~yO~eLax5dOvc2ooEH0dDKf~aonhxkS4yS4Y~kcCzLJq9lGS3BSfqO2Ye6SFQQCdcb77q0x6c6qi4L1ha1-NdOD-utRYft6X~wFpAf0eZVX9t68imOoW8SplL3eWFNrH74SvgBF~ML5PNKuB8mk9IJnTrpA1eNf6NL3jRkHCQvnlHkdsMiBExVqus8b~-0Vn824qVU4PncQ6ufblQs6oxt9ExpXug__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774637653&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=QLXQ9jBvtU~H2xLJV~MaDy2IDs8e7av9a9VMBsf-YuqVJqGf3GarSVPFyCYv4gFHmSdhQBAqQ1PO9vVisG3BzfZRFmbSrNlvqeweNDuvbKubVgWTghWWVQGrOX06P6SYZXTzmNGJ5n3uxYoEqVmF3ORlnoJd8lCyb0QnIYi~aWHphzc9QB5-KBbCdR5FkvxQ~S9i8VPrysWeFlXAHMtrXNnhSrkPjemNRMBxn~ZQQHfGXO~QoOIHKNSgWf3bcR35wjEo3IkJzRl2a4Sf8u59FNsjP6WPxVvet3d~K0s2ASLDDii2J-go0tevmIg9b1PRfsSTQJSbqX3a4QvIOadYbg__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774637653&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Yt8ttisS86vcm4H1XdTbJ7X0GCDiWiNqfe8wgGFlmxSCiEcXVzRNG~vbO-P5JT~eOG6m98oKEyK0222VGI0HMotXYm0ZKgwoEoeQBN7l-hpBQ3TcYolyLhoZwvkvTz8LdG2mYyCFbzjeRD193NeQ3dN5pF02d2j~LvNzJ5Okp73AX3L9aNHYQAl10YzD~6-inral24pTauExG-SgF2Z67R1PY2~vhVfFEYZAx5L3PiqoMtHxWSvVEsqQj4mBgkFdrnn-x5WALLA-IM-cVivOcKidxTQUVd6a2n9nm~w9FVBJ6~k3K2fFZfQbada19QucCBENLN65w~KKOpqUZC8-8A__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes